| MgSTS1 | Mimulus unigene: | MgU537 | Phytome id: | |
| | Arabidopsis homolog: | At5g54770 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 8 | 84.66cM |
 | Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AATGGAAGTTGCCGAAATTG | Overgo seq fw: | ACGACTTCAAATTCCAGCCCATCA |
| Reverse primer: | AATGCCAAGTGAGCTGCTTT | Overgo seq rv: | GCGACGATGGATTCCTTGATGGGC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 729(M13) | BAC contig(s): | MlFPC377, MlFPC711 |
| | | | |
| MgSTS2 | Mimulus unigene: | MgU803 | Phytome id: | mgut3498 |
| | Arabidopsis homolog: | At3g12050 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCGGCGAGTTCAGTATTTTC | Overgo seq fw: | AATTGGGCTCCTCGAAAGTTAGCC |
| Reverse primer: | AATTGGGCTCCTCGAAAGTT | Overgo seq rv: | ATTGTGTCCACGGTTCGGCTAACT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 842 | BAC contig(s): | |
| | | | |
| MgSTS3 | Mimulus unigene: | MgU876 | Phytome id: | mgut4029 |
| | Arabidopsis homolog: | At3g54250 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | A |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTTCACTCATGACCGCATGT | Overgo seq fw: | ATTCTCCCGATCAACGACAGCATT |
| Reverse primer: | CCGGAGTTCCCTCAAACAAT | Overgo seq rv: | GGTCGAGAGTAACGCTAATGCTGT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 708 | BAC contig(s): | |
| | | | |
| MgSTS4 | Mimulus unigene: | MgU881 | Phytome id: | mgut4062 |
| | Arabidopsis homolog: | At4g14910 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 14 | 0.00cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CGGTTTGGAGACTTCTCAGC | Overgo seq fw: | CTTGACGAAAAGCCCTTGCAAAGG |
| Reverse primer: | ACTCAAATGTGGCCTTCCAG | Overgo seq rv: | GAAGCAACCTTCAAGGCCTTTGCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 768 | BAC contig(s): | |
| | | | |
| MgSTS5 | Mimulus unigene: | MgU958 | Phytome id: | mgut4601 |
| | Arabidopsis homolog: | At3g54190 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAATCCGACACCGATGAGTC | Overgo seq fw: | GTTGCTCGCCTTGATTTTCGCTAG |
| Reverse primer: | GGCATTTTCCGGTCAAGATA | Overgo seq rv: | CTTGACCGGAAAATGCCTAGCGAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 859 | BAC contig(s): | |
| | | | |
| MgSTS6 | Mimulus unigene: | MgU1072 | Phytome id: | mgut472 |
| | Arabidopsis homolog: | At2g13360 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AACAACTTGGCCACCGTAAG | Overgo seq fw: | GACTGCTACTGGAGTTACCAACAA |
| Reverse primer: | CCACATCTATTCCCCACTCG | Overgo seq rv: | TCTTACGGTGGCCAAGTTGTTGGT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 691 | BAC contig(s): | |
| | | | |
| MgSTS7 | Mimulus unigene: | MgU151 | Phytome id: | |
| | Arabidopsis homolog: | At5g12040 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 5 | 0.00cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AATCGCCTACTCCTCCCATC | Overgo seq fw: | CCAGCTGGTAAAGATCGCCTCGTC |
| Reverse primer: | TCCTTAGCTTGTCGGCAGTT | Overgo seq rv: | CCATTAGAGAAGCAAAGACGAGGC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 639 | BAC contig(s): | |
| | | | |
| MgSTS8 | Mimulus unigene: | MgU183 | Phytome id: | mgut778 |
| | Arabidopsis homolog: | At3g07670 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCTCTTCGTTCCTCCCTCTC | Overgo seq fw: | GTGGAGGTAGGAGAGAGAGGACTC |
| Reverse primer: | ACTTCACCAGCCTCACGATT | Overgo seq rv: | TATTCTTCAAAGCGACGAGTCCTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 745 | BAC contig(s): | |
| | | | |
| MgSTS9 | Mimulus unigene: | MgU242 | Phytome id: | |
| | Arabidopsis homolog: | At5g08540 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62_x_DUN RILs(2009) | 5 | 55.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 5 | 44.75cM | | M. lewisii x M. cardinalis(2009) | 2+4 | 46.30cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TTAAGACCGTCCGCAAATTC | Overgo seq fw: | CGGCTTCTGAAACAGCGTGTAGAC |
| Reverse primer: | TCCCTTCTCGAACAGCTCAT | Overgo seq rv: | GATGCTGAGAAGCTTTGTCTACAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 741.6 | BAC contig(s): | MgFPC2768, MlFPC10, MlFPC20, MlFPC48 |
| | | | |
| MgSTS10 | Mimulus unigene: | MgU261 | Phytome id: | |
| | Arabidopsis homolog: | At2g33800 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGCCCATGACGAAATACAAG | Overgo seq fw: | TTAGAGCGTTGTTACTGCCTAGCT |
| Reverse primer: | CTGCCCCATAGTCTGCTTCA | Overgo seq rv: | AACGCCCTCGGAAAACAGCTAGGC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 852.5 | BAC contig(s): | |
| | | | |
| MgSTS11 | Mimulus unigene: | MgU340 | Phytome id: | mgut1342 |
| | Arabidopsis homolog: | At1g06570 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 13 | 31.10cM | | M. guttatus Irn Mtn Combined(2009) | 13 | 95.99cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 13 | 2.19cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCTCCAGATTTTCACCAAGC | Overgo seq fw: | GGAACTTTGCTCCAGATTTTCACC |
| Reverse primer: | ACATCCACCCTTCTGGTACG | Overgo seq rv: | TATCACCGACGGGCTTGGTGAAAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 774 | BAC contig(s): | MlFPC1619, MlFPC21, MlFPC729, MlFPC81 |
| | | | |
| MgSTS12 | Mimulus unigene: | MgU382 | Phytome id: | mgut1532 |
| | Arabidopsis homolog: | At1g51510 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | CGCTTTGACACCCTTGATTC | Overgo seq fw: | CCTCCTTCTGAAAGGACCTTTGCT |
| Reverse primer: | GCCTCCTCATGAACTCCAGTA | Overgo seq rv: | CGTTGATTGGGCATTCAGCAAAGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 848 | BAC contig(s): | |
| | | | |
| MgSTS13 | Mimulus unigene: | MgU460 | Phytome id: | |
| | Arabidopsis homolog: | At1g04850 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAATCCAGGCGAGGAGAAAT | Overgo seq fw: | AAGCGCAGGAGCACGCGGAGTTAA |
| Reverse primer: | AATCCGCAAAGTTCGAGAAA | Overgo seq rv: | AAATTGGTGTGTTTGGTTAACTCC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 618 | BAC contig(s): | |
| | | | |
| MgSTS14 | Mimulus unigene: | MgU464 | Phytome id: | mgut1852 |
| | Arabidopsis homolog: | At3g63410 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAGGAGCCATTGAAGGACTG | Overgo seq fw: | TACAAACGGGTTCACAGGTTCCGA |
| Reverse primer: | AAGCCTCAGCACCCTGTAAG | Overgo seq rv: | AAAGGCGGAGGATGTATCGGAACC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 646 | BAC contig(s): | |
| | | | |
| MgSTS15 | Mimulus unigene: | MgU485 | Phytome id: | |
| | Arabidopsis homolog: | At2g24060 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 11 | 51.99cM | | M. guttatus IM62_x_DUN RILs(2009) | 11 | 35.69cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCGTGTGGATTTGAAGGAGT | Overgo seq fw: | GGTCCAAGCCACCTGTTGATGAAG |
| Reverse primer: | CGCCGTCTTTCAAGAATCTC | Overgo seq rv: | GAAGAGATATCTAGGGCTTCATCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 556?603? | BAC contig(s): | MgFPC455, MgFPC468, MgFPC823, MlFPC1246, MlFPC1436, MlFPC448, MlFPC933 |
| | | | |
| MgSTS16 | Mimulus unigene: | MgU609 | Phytome id: | mgut2416 |
| | Arabidopsis homolog: | At3g23940 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62_x_DUN RILs(2009) | 14 | 7.34cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 14 | 10.11cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | |
| Forward primer: | CTGCAATCGAGGGATTTGAT | Overgo seq fw: | ATGTGCTACAGTCTGCAATCGAGG |
| Reverse primer: | GCTCGGTCGATTCAGTCTTC | Overgo seq rv: | TGTCGGCGATCAAATCCCTCGATT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 394 | BAC contig(s): | |
| | | | |
| MgSTS17 | Mimulus unigene: | MgU1140 | Phytome id: | mgut525 |
| | Arabidopsis homolog: | At5g12290 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 14 | 113.40cM | | M. guttatus Irn Mtn Combined(2009) | 14 | 48.66cM | | M. guttatus IM62_x_DUN RILs(2009) | 14 | 106.62cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GAGGCATGCAAAAGACACTG | Overgo seq fw: | GCTCCATGCGTGATGCAATACTCA |
| Reverse primer: | GTTTGAAGACCTGGCTTTGC | Overgo seq rv: | CAAACGGATCACAAGCTGAGTATT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 217 | BAC contig(s): | |
| | | | |
| MgSTS18 | Mimulus unigene: | MgU772 | Phytome id: | mgut3331 |
| | Arabidopsis homolog: | At5g18580 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 14 | 91.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 14 | 80.52cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGTTGGCCAAGTATCGATTT | Overgo seq fw: | AAAAGAGCGCCGAAGCTGGCTCCA |
| Reverse primer: | AGGCAAACCCACATAGCATC | Overgo seq rv: | TTGTAGAAGCTTGGAATGGAGCCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 265 | BAC contig(s): | MgFPC836, MlFPC1192, MlFPC1618 |
| | | | |
| MgSTS19 | Mimulus unigene: | MgU140 | Phytome id: | mgut658 |
| | Arabidopsis homolog: | At1g60430 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 39.90cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 26.78cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ATTTGCCGTTCCACAATCTC | Overgo seq fw: | CGCCACACTCAATAACCTCCCACT |
| Reverse primer: | AGTTCCATTCGACCGATACG | Overgo seq rv: | GATACGTGAAGAAACGAGTGGGAG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 334 | BAC contig(s): | MlFPC147, MlFPC55 |
| | | | |
| MgSTS20 | Mimulus unigene: | MgU529 | Phytome id: | |
| | Arabidopsis homolog: | At3g56940 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 19.10cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 14.58cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACTGGTGCCAAGACGAGAAT | Overgo seq fw: | GGATGCTCAACATCTGGTACCGCT |
| Reverse primer: | ATCCCCTCGTAAAAGGCTGT | Overgo seq rv: | CTGCAAGAATATTCCCAGCGGTAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 275 | BAC contig(s): | |
| | | | |
| MgSTS21 | Mimulus unigene: | MgU551 | Phytome id: | |
| | Arabidopsis homolog: | At2g39730 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 6 | 64.60cM | | M. guttatus Irn Mtn Combined(2009) | 6 | 38.25cM | | M. guttatus IM62_x_DUN RILs(2009) | 6 | 63.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 6 | 60.45cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACTTGTTTTCGCCAAGATGG | Overgo seq fw: | CCGTTCTCAACTCCTACGACTATA |
| Reverse primer: | GTTGATGAAGAGGCAGCACA | Overgo seq rv: | TTAAGGCCCTGGCTGATATAGTCG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 229 | BAC contig(s): | |
| | | | |
| MgSTS22 | Mimulus unigene: | MgU1122 | Phytome id: | mgut510 |
| | Arabidopsis homolog: | At2g40090 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 6 | 93.50cM | | M. guttatus IM62_x_DUN RILs(2009) | 6 | 89.95cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 6 | 24.77cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGGGTGTTCAACCAAGTGAT | Overgo seq fw: | GACTTCATGATCGAGGCCAAGAAC |
| Reverse primer: | CCCATGCTTAAACATCATTTCA | Overgo seq rv: | CCAAGCACTTTACGCTGTTCTTGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 286 | BAC contig(s): | |
| | | | |
| MgSTS23 | Mimulus unigene: | MgU475 | Phytome id: | mgut1903 |
| | Arabidopsis homolog: | At3g04240 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 7 | 2.19cM |
| Set: | B / C |
| Guttatus map status: | genotyped by size (map position yet to be determined) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGCGTTTAACTTGCCCTCTT | Overgo seq fw: | CCTGTTTGTAAGGTCTCGGAGCTT |
| Reverse primer: | CTCCATGTCGTTCTCAGCAA | Overgo seq rv: | GGCACTGAATCCTTCAAAGCTCCG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 241 | BAC contig(s): | MgFPC12, MgFPC1645, MgFPC183, MgFPC227 |
| | | | |
| MgSTS24 | Mimulus unigene: | MgU125 | Phytome id: | mgut587 |
| | Arabidopsis homolog: | At2g44160 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 14 | 150.80cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 14 | 139.17cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGACAAGTTCGTCCAAGTCG | Overgo seq fw: | GCACTCGACCTGGTCAAGCATATC |
| Reverse primer: | CCCCTCCCTCCTGAATAACA | Overgo seq rv: | CACCATATTCAGAACGGATATGCT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 386 | BAC contig(s): | MgFPC581, MlFPC961 |
| | | | |
| MgSTS25 | Mimulus unigene: | MgU504 | Phytome id: | |
| | Arabidopsis homolog: | At5g52570 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 6 | 18.00cM | | M. guttatus Irn Mtn Combined(2009) | 6 | 35.22cM | | M. guttatus IM62_x_DUN RILs(2009) | 6 | 10.08cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AATGGAGATGTGGGCAAGAT | Overgo seq fw: | CTTCCCTATCCAGCTCTTCCAACC |
| Reverse primer: | AATTGCGGGAACAGCATTAG | Overgo seq rv: | CTTGAAGAAGTAGGAGGGTTGGAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 291 | BAC contig(s): | MgFPC2983, MgFPC3262, MgFPC66, MlFPC1, MlFPC10, MlFPC1880, MlFPC75 |
| | | | |
| MgSTS26 | Mimulus unigene: | MgU229 | Phytome id: | mgut921 |
| | Arabidopsis homolog: | At1g20580 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 12.40cM | | M. guttatus IM62_x_DUN RILs(2009) | 11 | 5.18cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 7.19cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GATGGAAAGCTCTCGCAACT | Overgo seq fw: | CCTAGCTTCTAAACGCTTAAACAT |
| Reverse primer: | CGCTTAAACATGGGAGCATT | Overgo seq rv: | GCTCAAGAATGCTCCCATGTTTAA |
| Tm: | | Tm: | 63.35 |
| IM62 length | 180 | BAC contig(s): | MgFPC1692, MlFPC184, MlFPC23 |
| | | | |
| MgSTS27 | Mimulus unigene: | MgU374 | Phytome id: | mgut1502 |
| | Arabidopsis homolog: | At5g20570 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 63.20cM | | M. guttatus Irn Mtn Combined(2009) | 10 | 54.85cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 10 | 87.90cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGGAAGGTGTTCGAGATCAA | Overgo seq fw: | CCACCTGCTAATACAGTGGAAGTG |
| Reverse primer: | TCCTGCAAATCGCACAATTA | Overgo seq rv: | TTGCAACCATGCGTTCCACTTCCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 195 | BAC contig(s): | MlFPC1124, MlFPC242, MlFPC37, MlFPC50, MlFPC718, MlFPC971 |
| | | | |
| MgSTS28 | Mimulus unigene: | MgU836 | Phytome id: | |
| | Arabidopsis homolog: | At5g58330 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 6 | 107.60cM | | M. guttatus Irn Mtn Combined(2009) | 6 | 56.29cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 6 | 14.29cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CGATTGTTGATGCAATCAGG | Overgo seq fw: | GGAAGCATTGTATCTCCCGGAAGA |
| Reverse primer: | GCACGGCATACTGAAGACAA | Overgo seq rv: | GTATCGCTGTGTGTGATCTTCCGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 245.6 | BAC contig(s): | MlFPC149, MlFPC1534 |
| | | | |
| MgSTS29 | Mimulus unigene: | MgU839 | Phytome id: | mgut3758 |
| | Arabidopsis homolog: | At4g29040 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 14 | 106.60cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGGGATCTTGTCGTTTGTTG | Overgo seq fw: | GTCGTTTGTTGATAAGGATCAACT |
| Reverse primer: | ACAGATACCATGGGGTCCAC | Overgo seq rv: | CGCACATCCAGGCTCGAGTTGATC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 430 | BAC contig(s): | MgFPC693, MlFPC1197, MlFPC1433, MlFPC1455, MlFPC1913, MlFPC231, MlFPC322, MlFPC542, MlFPC989 |
| | | | |
| MgSTS30 | Mimulus unigene: | MgU860 | Phytome id: | mgut3908 |
| | Arabidopsis homolog: | At5g63860 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 8 | 55.70cM |
| Set: | |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | TGGTGTAGGTGACAGCATCG | Overgo seq fw: | |
| Reverse primer: | TGAGAACACGTTCTGCCTGT | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 233 | BAC contig(s): | |
| | | | |
| MgSTS31 | Mimulus unigene: | MgU886 | Phytome id: | mgut4096 |
| | Arabidopsis homolog: | At5g46110 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 8 | 81.67cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 8 | 67.73cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGGGTTGGAATGTTTTACCA | Overgo seq fw: | CCACTCTCTCGAGTGTGTTCGTTG |
| Reverse primer: | CGAAGGCCAAGATTGAGAAG | Overgo seq rv: | CTCTACAATCAGCTTGCAACGAAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 216 | BAC contig(s): | |
| | | | |
| MgSTS32 | Mimulus unigene: | MgU949 | Phytome id: | mgut4543 |
| | Arabidopsis homolog: | At1g60000 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACCGGAAAAAGCAGAGGATT | Overgo seq fw: | CCACAACCGAAGGAGCCACTATAT |
| Reverse primer: | GGCTGTGCCGAGAAAGTAAC | Overgo seq rv: | TGTAGTCCGTTTCCGAATATAGTG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 244(M13) | BAC contig(s): | |
| | | | |
| MgSTS33 | Mimulus unigene: | MgU962 | Phytome id: | mgut4637 |
| | Arabidopsis homolog: | At5g53180 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TTGATGGGAAAAAGCTGGAC | Overgo seq fw: | GTCCATCCAAGGCTTGCTTTGAAG |
| Reverse primer: | GAACAGGCCCAAAAGATGAA | Overgo seq rv: | GCTCAGACTGCTATTGCTTCAAAG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 218.6(M13) | BAC contig(s): | |
| | | | |
| MgSTS34 | Mimulus unigene: | MgU963 | Phytome id: | mgut4646 |
| | Arabidopsis homolog: | At4g13430 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 7 | 31.30cM | | M. guttatus Irn Mtn Combined(2009) | 7 | 21.47cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 7 | 16.68cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACGAACGAGCAAATCGAAAT | Overgo seq fw: | TTCTGTAATGACACCTCAGCAATC |
| Reverse primer: | CTCCTGGACGACAATGACCT | Overgo seq rv: | GGAGGGTTTGCGCTCAGATTGCTG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 249 | BAC contig(s): | MgFPC478, MlFPC172, MlFPC954 |
| | | | |
| MgSTS35 | Mimulus unigene: | MgU977 | Phytome id: | mgut4753 |
| | Arabidopsis homolog: | At3g21300 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 9 | 18.70cM | | M. guttatus Irn Mtn Combined(2009) | 9 | 67.41cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAAATCGGGGAGAATTTTGG | Overgo seq fw: | GTGAGGAGTGTGCGGAAACATGTC |
| Reverse primer: | CACACGTGGCTGGATTACAC | Overgo seq rv: | AAGCATTCAACCAGTGGACATGTT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 251 | BAC contig(s): | MgFPC400, MlFPC107, MlFPC1653 |
| | | | |
| MgSTS36 | Mimulus unigene: | MgU1001 | Phytome id: | mgut7 |
| | Arabidopsis homolog: | At5g06600 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 12 | 110.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 12 | 48.47cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGTGGATGAGAAGGACGTTG | Overgo seq fw: | GTTAAACGGGTACTCGAAGAACAG |
| Reverse primer: | GGCTTGCGCTTTGTATCTTT | Overgo seq rv: | CTTCCTCACCACCATACTGTTCTT |
| Tm: | | Tm: | 64.38 |
| IM62 length | 185 | BAC contig(s): | MgFPC2960, MgFPC366, MlFPC1188, MlFPC145, MlFPC1877, MlFPC289, MlFPC371, MlFPC907 |
| | | | |
| MgSTS37 | Mimulus unigene: | MgU1047 | Phytome id: | mgut334 |
| | Arabidopsis homolog: | At3g54050 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 79.30cM | | M. guttatus Irn Mtn Combined(2009) | 10 | 97.95cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 10 | 104.32cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGGTGTTCAGGGTGCTGTAA | Overgo seq fw: | CAGGGAGAGGATCAGAAGAAGCTT |
| Reverse primer: | CCGATGCTATGATCCCTGTT | Overgo seq rv: | CGTTGGAGACAACATCAAGCTTCT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 434 | BAC contig(s): | MlFPC1049, MlFPC1626, MlFPC1784, MlFPC730 |
| | | | |
| MgSTS38 | Mimulus unigene: | MgU1179 | Phytome id: | mgut552 |
| | Arabidopsis homolog: | At3g14390 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | ATGAGCATGGCATCGACATA | Overgo seq fw: | |
| Reverse primer: | GTCTCACCGTGTCGGATTTT | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 187 | BAC contig(s): | |
| | | | |
| MgSTS39 | Mimulus unigene: | MgU628 | Phytome id: | mgut2518 |
| | Arabidopsis homolog: | At1g72090 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | B / C |
| Guttatus map status: | polymorphic by size | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTCGGAAGACACTACCAGCA | Overgo seq fw: | GAGCGTTTCCCGTGATTATCTCAA |
| Reverse primer: | TCGGAAGGATCTCCACAAAC | Overgo seq rv: | GGAAGTGCTGTAGTCCTTGAGATA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 207 | BAC contig(s): | |
| | | | |
| MgSTS40 | Mimulus unigene: | MgU633 | Phytome id: | mgut2557 |
| | Arabidopsis homolog: | At4g31180 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 5 | 16.40cM | | M. guttatus Irn Mtn Combined(2009) | 5 | 15.24cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 5 | 106.08cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGGCAGCTTGTACTGGAAAA | Overgo seq fw: | AGAATAGCATCACCACTCGCTCCA |
| Reverse primer: | GGGTAGCGGTGAAGGATGTA | Overgo seq rv: | GGATTTGGAGTGGGATTGGAGCGA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 144.5 | BAC contig(s): | MgFPC1152, MgFPC159, MgFPC313, MlFPC1438, MlFPC169, MlFPC258, MlFPC454, MlFPC486 |
| | | | |
| MgSTS41 | Mimulus unigene: | MgU723 | Phytome id: | mgut3067 |
| | Arabidopsis homolog: | At3g59630 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGTAGCGGAATTCATCCTCA | Overgo seq fw: | CGGAATTCATCCTCAGCCATAGCT |
| Reverse primer: | GCAGAGCTTTCACCACCTTC | Overgo seq rv: | AGAGCTACTCTGGTGAAGCTATGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 188.5 | BAC contig(s): | |
| | | | |
| MgSTS42 | Mimulus unigene: | MgU0 | Phytome id: | |
| | Arabidopsis homolog: | At3g23530 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AGGCCACTTCATCCAGTCAC | Overgo seq fw: | GGGGGCCATGCTAAAACTGTTACT |
| Reverse primer: | CTTCCGAAGAACACGACCAT | Overgo seq rv: | GAGAAGTGCCATCAACAGTAACAG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 170 | BAC contig(s): | |
| | | | |
| MgSTS43 | Mimulus unigene: | MgU123 | Phytome id: | mgut578 |
| | Arabidopsis homolog: | At2g24270 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 47.50cM | | M. guttatus Irn Mtn Combined(2009) | 10 | 37.88cM | | M. guttatus IM62_x_DUN RILs(2009) | 10 | 56.50cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 10 | 71.58cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCGGGAAACGATAGAACAAA | Overgo seq fw: | GCCGATGGAGAGTGGCTTACTTCT |
| Reverse primer: | CAAGGGAGTTCCCTGCAATA | Overgo seq rv: | CAGATTTGCCAGAAGAAGAAGTAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 232 | BAC contig(s): | |
| | | | |
| MgSTS44 | Mimulus unigene: | MgU146 | Phytome id: | |
| | Arabidopsis homolog: | At1g19110 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CGATTTTGATCGAAGGGAAA | Overgo seq fw: | GAAGGCAGCATCATAGTAACCCCT |
| Reverse primer: | CCAAGATTGCGGTCTTGACT | Overgo seq rv: | GCTTGCACAAATCGGAAGGGGTTA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 347 | BAC contig(s): | |
| | | | |
| MgSTS45 | Mimulus unigene: | MgU176 | Phytome id: | mgut763 |
| | Arabidopsis homolog: | At3g07670 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 13 | 30.20cM | | M. guttatus Irn Mtn Combined(2009) | 13 | 99.33cM | | M. guttatus IM62_x_DUN RILs(2009) | 13 | 7.08cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTGCTGCTGCATCGAATAAA | Overgo seq fw: | CAGCGTGCCGCTTCGTATATCTCT |
| Reverse primer: | GTCCAAATCCATCGATCCAC | Overgo seq rv: | ATTGAGGAGGAGATTGAGAGATAT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 262.7 | BAC contig(s): | MgFPC2651, MgFPC2723, MgFPC2724, MlFPC81 |
| | | | |
| MgSTS46 | Mimulus unigene: | MgU212 | Phytome id: | |
| | Arabidopsis homolog: | At3g04240 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | A |
| Guttatus map status: | polymorphic by size | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AGTGCTGCAGCTCAATGCTA | Overgo seq fw: | GGCAACACTATCTGTTACAACAGG |
| Reverse primer: | GCTGGATCGATTCTGAGGAC | Overgo seq rv: | GAAAGGAGCAGCAAGCCCTGTTGT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 330 | BAC contig(s): | |
| | | | |
| MgSTS47 | Mimulus unigene: | MgU222 | Phytome id: | mgut900 |
| | Arabidopsis homolog: | At2g25280 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GAGCTTGATGGGTGGCTTAG | Overgo seq fw: | GTCTCTCATGGATTTGCAGTGGCT |
| Reverse primer: | AATGTTGCCAAAGGCATAGG | Overgo seq rv: | GCGATACGAACAGTCAAGCCACTG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 217 | BAC contig(s): | |
| | | | |
| MgSTS48 | Mimulus unigene: | MgU223 | Phytome id: | |
| | Arabidopsis homolog: | At3g53970 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 77.60cM |
| Set: | A / D2 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TCCTGGAGTACCTGGTTTCG | Overgo seq fw: | TGAAATCAGCGTCGCCGTGAAAGT |
| Reverse primer: | TGAAAGTGGTGCAAATCTGG | Overgo seq rv: | CATCCAGATTTGCACCACTTTCAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 363 | BAC contig(s): | |
| | | | |
| MgSTS49 | Mimulus unigene: | MgU226 | Phytome id: | |
| | Arabidopsis homolog: | At5g63890 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 2 | 73.10cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACATAGCTGCGGATTTGCTT | Overgo seq fw: | CAGAACCTGCATTCTCAACGAAAC |
| Reverse primer: | CCTCTCCGGCAACTACAAGA | Overgo seq rv: | GCCGAGAAGTGGGAAAGTTTCGTT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 366 | BAC contig(s): | |
| | | | |
| MgSTS50 | Mimulus unigene: | MgU231 | Phytome id: | |
| | Arabidopsis homolog: | At2g46280 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 3 | 6.20cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 3 | 2.99cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCTACGTGACAGAACGTCCA | Overgo seq fw: | AATGGTGCAACCTCACATATCCAT |
| Reverse primer: | TCCTGACCACCTCCAAGAAC | Overgo seq rv: | TCGAGCGGAGGTGAAGATGGATAT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 182.7 | BAC contig(s): | MlFPC29, MlFPC662 |
| | | | |
| MgSTS51 | Mimulus unigene: | MgU301 | Phytome id: | |
| | Arabidopsis homolog: | At3g55440 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | C2 |
| Guttatus map status: | genotyped by size (map position yet to be determined) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCTGATGTTGACGGTTTCCT | Overgo seq fw: | GTGTCCATGCTTAATGCGGCTGAA |
| Reverse primer: | TCAGCAGCCTTGATGATGTC | Overgo seq rv: | CATCTTGCGATGGTACTTCAGCCG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 177 | BAC contig(s): | |
| | | | |
| MgSTS52 | Mimulus unigene: | MgU314 | Phytome id: | |
| | Arabidopsis homolog: | At3g26580 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 11 | 29.04cM |
| Set: | |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | GATTTGGGGCAGAAAGCATA | Overgo seq fw: | |
| Reverse primer: | TGCTAGCCTCGTAAGCCATT | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 250 | BAC contig(s): | |
| | | | |
| MgSTS53 | Mimulus unigene: | MgU358 | Phytome id: | |
| | Arabidopsis homolog: | At2g20060 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 12 | 5.36cM | | M. guttatus IM62_x_DUN RILs(2009) | 12 | 0.00cM |
| Set: | C / C2 |
| Guttatus map status: | polymorphic by size | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GATGGCAGCTTGCTAAAAGG | Overgo seq fw: | CTTCACGTGACATAACGAGCGTAT |
| Reverse primer: | TTTCTACCGGTCCCACTCAC | Overgo seq rv: | AGCATTCTGCTGCACGATACGCTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 228 | BAC contig(s): | |
| | | | |
| MgSTS54 | Mimulus unigene: | MgU445 | Phytome id: | |
| | Arabidopsis homolog: | At1g06820 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | TCAAATTCGATGTGGGATCA | Overgo seq fw: | |
| Reverse primer: | AAACCCGACTGCTGCTAATG | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 366 | BAC contig(s): | |
| | | | |
| MgSTS55 | Mimulus unigene: | MgU462 | Phytome id: | |
| | Arabidopsis homolog: | At4g21280 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 13 | 93.00cM | | M. guttatus Irn Mtn Combined(2009) | 13 | 34.83cM | | M. guttatus IM62_x_DUN RILs(2009) | 13 | 60.72cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 13 | 65.61cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCTCACTTCCAAGCTCCTCA | Overgo seq fw: | TTCAGTGTGGACACAGTTTCAGCG |
| Reverse primer: | TGTGGACACAGTTTCAGCGTA | Overgo seq rv: | AGGCGGAGAAGTACTACGCTGAAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 199/213 | BAC contig(s): | MgFPC241, MgFPC2585, MgFPC2768, MgFPC30, MlFPC1223, MlFPC1242, MlFPC494, MlFPC711 |
| | | | |
| MgSTS56 | Mimulus unigene: | MgU520 | Phytome id: | |
| | Arabidopsis homolog: | At3g63490 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 2 | 82.70cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGACTGATGCCAAACCCTAA | Overgo seq fw: | ACACCTTTTGCCCCCGATGGCTTG |
| Reverse primer: | AATCTGCCTTCCCAAAAGGT | Overgo seq rv: | AATCAGTAGACTCGAACAAGCCAT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 229.7 | BAC contig(s): | |
| | | | |
| MgSTS57 | Mimulus unigene: | MgU94 | Phytome id: | mgut4476 |
| | Arabidopsis homolog: | At2g45290 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | B / C |
| Guttatus map status: | polymorphic by size | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGTGAACTACCTTCCGGTTG | Overgo seq fw: | TTGAGGTTTGTCTGGGAGAGGTTT |
| Reverse primer: | TTAGACCGGGGAGAACCTTT | Overgo seq rv: | CAGGCGATGCAACAAGAAACCTCT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 231 | BAC contig(s): | |
| | | | |
| MgSTS58 | Mimulus unigene: | MgU768 | Phytome id: | mgut3310 |
| | Arabidopsis homolog: | At5g58420 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 6 | 77.20cM | | M. guttatus Irn Mtn Combined(2009) | 6 | 38.54cM | | M. guttatus Irn Mtn Combined(2009) | 10 | 104.17cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 6 | 42.12cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TCAATCAGGGATGAGGAAGC | Overgo seq fw: | CCCTTCTTTCCGAACTGAACTGAG |
| Reverse primer: | ATGGTGTCGTTTGCCTTGAT | Overgo seq rv: | AGCTATGCAAAGTCCGCTCAGTTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 242.6 | BAC contig(s): | MgFPC33, MlFPC1224, MlFPC1472, MlFPC152, MlFPC261, MlFPC410, MlFPC696 |
| | | | |
| MgSTS59 | Mimulus unigene: | MgU832 | Phytome id: | mgut3701 |
| | Arabidopsis homolog: | At5g67030 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 8 | 42.10cM | | M. guttatus Irn Mtn Combined(2009) | 8 | 34.93cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 8 | 29.19cM |
| Set: | A / D2 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TTTCCGATTGGAGATTCGAC | Overgo seq fw: | GCGATCGGATTAATGGCTTGCTTG |
| Reverse primer: | ACTCCAGGAACGTTTGGATG | Overgo seq rv: | TTGCCGGAAATGCCATCAAGCAAG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 203.5 | BAC contig(s): | MgFPC260, MgFPC394, MgFPC542 |
| | | | |
| MgSTS60 | Mimulus unigene: | MgU867 | Phytome id: | mgut3962 |
| | Arabidopsis homolog: | At5g47820 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | CTCTATGGCCGATGCAAAAA | Overgo seq fw: | |
| Reverse primer: | CGAGCTCCTTCATCTGCTCT | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 666 | BAC contig(s): | |
| | | | |
| MgSTS61 | Mimulus unigene: | MgU880 | Phytome id: | mgut4060 |
| | Arabidopsis homolog: | At1g32900 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 8 | 107.58cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GACCCCACGGACGTACTAAA | Overgo seq fw: | TTTGCAAGCGGAGCAATTTCGTCG |
| Reverse primer: | AGCAGCAGTGATTCCCACTT | Overgo seq rv: | AACCCGGTATTGAAGGCGACGAAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 595 | BAC contig(s): | |
| | | | |
| MgSTS62 | Mimulus unigene: | MgU888 | Phytome id: | mgut4111 |
| | Arabidopsis homolog: | At5g62050 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D / D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ACGCCTTTGAAGGGACTTCT | Overgo seq fw: | CGGTGGCTGCTCTCCAGTATTTGA |
| Reverse primer: | GTTTTCCGCCATGTTCCTAA | Overgo seq rv: | CAATGCACGTAGTCAATCAAATAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 183 | BAC contig(s): | |
| | | | |
| MgSTS63 | Mimulus unigene: | MgU890 | Phytome id: | mgut4122 |
| | Arabidopsis homolog: | At5g13260 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 11 | 1.82cM | | M. guttatus IM62_x_DUN RILs(2009) | 11 | 75.02cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 59.34cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AACCATCCGCAAAGGAGTAA | Overgo seq fw: | GGGAAGCTTCCCAAAGCCGTTGCT |
| Reverse primer: | TTTGGACGTCTTTGTTGAGC | Overgo seq rv: | AGGAAATTGGGAATCAAGCAACGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 536.5 | BAC contig(s): | |
| | | | |
| MgSTS64 | Mimulus unigene: | MgU902 | Phytome id: | mgut4204 |
| | Arabidopsis homolog: | At5g18200 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 2 | 78.67cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CGGGTTCACCTGACTGATCT | Overgo seq fw: | CGGCTCGTTCAACTGCAAACACAT |
| Reverse primer: | CTGTGCGAGTGGCTCATAGA | Overgo seq rv: | ACTTACGCTTGCGAAGATGTGTTT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 828 | BAC contig(s): | MlFPC159, MlFPC1640, MlFPC713, MlFPC805 |
| | | | |
| MgSTS65 | Mimulus unigene: | MgU910 | Phytome id: | mgut4269 |
| | Arabidopsis homolog: | At2g17420 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCCATTACTGCAGCTGGAAC | Overgo seq fw: | CCGATCTCTTGAAGGTAATGTTCT |
| Reverse primer: | GCATCTAATGCCGCCATAC | Overgo seq rv: | TGGCGGCATTAGATGCAGAACATT |
| Tm: | | Tm: | 64.38 |
| IM62 length | >1000 | BAC contig(s): | |
| | | | |
| MgSTS66 | Mimulus unigene: | MgU917 | Phytome id: | mgut4317 |
| | Arabidopsis homolog: | At5g63910 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | |
| Guttatus map status: | did not amplify in IM62 but did amplify in at least one other genotype (possible PCR error in IM62)) | Phys map status: | |
| Forward primer: | ATCAATACCCCGGAGAGAGC | Overgo seq fw: | |
| Reverse primer: | AGAACGGTGCATCATCGAAT | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS67 | Mimulus unigene: | MgU926 | Phytome id: | mgut4376 |
| | Arabidopsis homolog: | At2g04030 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D / D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAGTGTTTCTCCGGGAGCTT | Overgo seq fw: | AGCTTTTCGAGGAGTGGATTGGAG |
| Reverse primer: | GCTAGCTCACCAGCATCTCC | Overgo seq rv: | TCCTCTCCAGTTTCCACTCCAATC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 222 | BAC contig(s): | |
| | | | |
| MgSTS68 | Mimulus unigene: | MgU927 | Phytome id: | mgut4384 |
| | Arabidopsis homolog: | At5g44520 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 13 | 137.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 13 | 104.31cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AGTGCAACTGAAGCAGCAAA | Overgo seq fw: | TCGACGAATCCAACCTACTCCTCC |
| Reverse primer: | CTACAACATCCGCATCATCG | Overgo seq rv: | GTGTATTTAGCGGCTTGGAGGAGT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 357 | BAC contig(s): | |
| | | | |
| MgSTS69 | Mimulus unigene: | MgU967 | Phytome id: | mgut4683 |
| | Arabidopsis homolog: | At3g29320 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 8 | 15.32cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GAGGAAGTGGGAGACGACAA | Overgo seq fw: | CGAATAGTTCTGTCACTGCTGAAC |
| Reverse primer: | CCTTCCAACGATCCAATCAT | Overgo seq rv: | CAGCAGGTTCCTACAAGTTCAGCA |
| Tm: | | Tm: | 64.38 |
| IM62 length | 306.6 | BAC contig(s): | MlFPC337, MlFPC842 |
| | | | |
| MgSTS70 | Mimulus unigene: | MgU968 | Phytome id: | mgut4688 |
| | Arabidopsis homolog: | At2g41700 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 17.20cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTTGCTGATGTTTTCGGACA | Overgo seq fw: | CGAGTGTCGATTGGCTGATGCTAT |
| Reverse primer: | GAATTCGTTGCGAAATGGTT | Overgo seq rv: | CTTGGAATATCAGAGTATAGCATC |
| Tm: | | Tm: | 63.35 |
| IM62 length | 201 | BAC contig(s): | MgFPC2932, MlFPC1552, MlFPC157, MlFPC189, MlFPC337, MlFPC384, MlFPC406, MlFPC470, MlFPC527, MlFPC560, MlFPC579, MlFPC615, MlFPC840 |
| | | | |
| MgSTS71 | Mimulus unigene: | MgU970 | Phytome id: | mgut4703 |
| | Arabidopsis homolog: | At5g66120 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GATTTTGCCAGATGGAGAGC | Overgo seq fw: | CCTTTCAAGAGTATCAGCCGTAGG |
| Reverse primer: | CACATGTCACCGATGACTCC | Overgo seq rv: | AGGTTGCAGACGGTTTCCTACGGC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 229 | BAC contig(s): | |
| | | | |
| MgSTS72 | Mimulus unigene: | MgU971 | Phytome id: | |
| | Arabidopsis homolog: | At5g24300 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D / D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | ATGCGATACGGCACTATTCC | Overgo seq fw: | CCCATGATGGCTTGTGCTCTTTGT |
| Reverse primer: | AGTCCCTTCACCGCTACCTT | Overgo seq rv: | ATAGCCGTCGGAACATACAAAGAG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 206 | BAC contig(s): | |
| | | | |
| MgSTS73 | Mimulus unigene: | MgU1016 | Phytome id: | mgut124 |
| | Arabidopsis homolog: | At5g61150 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 4 | 51.47cM | | M. guttatus Irn Mtn Combined(2009) | 7 | 13.92cM |
| Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TTTTCGTCAGGCATGGAAAG | Overgo seq fw: | CCTACGGATGGGTTGCGTATATTT |
| Reverse primer: | AATTCGACCCTGAGATTGGA | Overgo seq rv: | GGAGAAGGTAACCCGTAAATATAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 250 | BAC contig(s): | |
| | | | |
| MgSTS74 | Mimulus unigene: | MgU1097 | Phytome id: | |
| | Arabidopsis homolog: | At1g08410 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAGGCAGATCTCCTCCCATT | Overgo seq fw: | GACTGCAGACGAGCAAGTAGCTCA |
| Reverse primer: | AGCAGACTTTGCTGACCAGA | Overgo seq rv: | AACTATATGGCAGGGATGAGCTAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 183 | BAC contig(s): | |
| | | | |
| MgSTS75 | Mimulus unigene: | MgU1116 | Phytome id: | |
| | Arabidopsis homolog: | At2g41530 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 10 | 13.70cM | | M. guttatus IM62_x_DUN RILs(2009) | 10 | 95.48cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 10 | 29.32cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGACATGTAGCGCTCGTAAT | Overgo seq fw: | CGAGTGATCGTAACCCGCTTGCAT |
| Reverse primer: | ATAGGTGCAAAAGCCGACAC | Overgo seq rv: | TCCTCTGTTACTCAGAATGCAAGC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 177 | BAC contig(s): | |
| | | | |
| MgSTS76 | Mimulus unigene: | MgU1118 | Phytome id: | mgut506 |
| | Arabidopsis homolog: | At4g15560 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62_x_DUN RILs(2009) | 8 | 83.70cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GATTTCCCGATCGTTGCTT | Overgo seq fw: | ATTCATATCGTCACCGAAAAAGGC |
| Reverse primer: | AAGATCCACATCATGCACCA | Overgo seq rv: | CCGGAGGGTAGCCTTTGCCTTTTT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 259 | BAC contig(s): | MgFPC2041, MgFPC273, MgFPC2779, MgFPC3005, MgFPC414, MgFPC604, MlFPC1205, MlFPC464, MlFPC472, MlFPC545, MlFPC680, MlFPC995 |
| | | | |
| MgSTS77 | Mimulus unigene: | MgU1148 | Phytome id: | |
| | Arabidopsis homolog: | At2g29980 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | CATCACGGTCACGAGAAGAA | Overgo seq fw: | AGGGTAGCTTCTTCTCGTGACCGT |
| Reverse primer: | CTGAGGGAAGAGGTGGTGAA | Overgo seq rv: | ACATATCTGCACCATCACGGTCAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | "369?,377?" | BAC contig(s): | |
| | | | |
| MgSTS78 | Mimulus unigene: | MgU1174 | Phytome id: | mgut548 |
| | Arabidopsis homolog: | At3g46780 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCTCGATTGGCTGTCAATTA | Overgo seq fw: | TTTCCGCCGCCCAGGAATTAGCTC |
| Reverse primer: | ATGGCTCTGGCAATTGATTC | Overgo seq rv: | TAATTGACAGCCAATCGAGCTAAT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 102 | BAC contig(s): | |
| | | | |
| MgSTS79 | Mimulus unigene: | MgU1190 | Phytome id: | mgut560 |
| | Arabidopsis homolog: | At3g16630 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GATCTTTTGAGCGACAGGAAG | Overgo seq fw: | GCAGCAGAAGACCTCGTTAGATTG |
| Reverse primer: | TGTTGTCTACCATCTTCTCTCATACA | Overgo seq rv: | AAACTGGCTGATGCAGCAATCTAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 234.5 | BAC contig(s): | |
| | | | |
| MgSTS80 | Mimulus unigene: | MgU581 | Phytome id: | mgut2347 |
| | Arabidopsis homolog: | At5g23050 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AAGGAGCTACGCTCGTCAGT | Overgo seq fw: | GCTGTGATATGGCGCGATGAAGGA |
| Reverse primer: | CAATTGCAGAGCCTTTCTCC | Overgo seq rv: | CTGGATTTTCATCATCTCCTTCAT |
| Tm: | | Tm: | 64.38 |
| IM62 length | 206 | BAC contig(s): | |
| | | | |
| MgSTS81 | Mimulus unigene: | MgU610 | Phytome id: | mgut2420 |
| | Arabidopsis homolog: | At4g02460 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D / D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGCTGCTACCAGTGAGTTGG | Overgo seq fw: | GCTGTCAAGACTCCGGTGCATGAA |
| Reverse primer: | TTCCCGATAATGAAGCCAAG | Overgo seq rv: | TCTTCCAGAAGCATGATTCATGCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 355 | BAC contig(s): | |
| | | | |
| MgSTS82 | Mimulus unigene: | MgU645 | Phytome id: | mgut2617 |
| | Arabidopsis homolog: | At5g13630 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62_x_DUN RILs(2009) | 10 | 93.62cM |
| Set: | |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | ACAAATCTCGTGCAGGGTCT | Overgo seq fw: | |
| Reverse primer: | ACGGTTTCCGAAAGTGTACG | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | 472 | BAC contig(s): | |
| | | | |
| MgSTS83 | Mimulus unigene: | MgU658 | Phytome id: | mgut2692 |
| | Arabidopsis homolog: | At1g21750 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | CAGCTTTACAAGGGCCAAGA | Overgo seq fw: | GAATACAAAGGACCACGAGAGGCA |
| Reverse primer: | GTTCATCCTTGAGCCCAAAATA | Overgo seq rv: | AGGTCACAATGCCATCTGCCTCTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 172 | BAC contig(s): | |
| | | | |
| MgSTS84 | Mimulus unigene: | MgU667 | Phytome id: | mgut2749 |
| | Arabidopsis homolog: | At2g23460 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 8 | 30.35cM | | M. guttatus IM62_x_DUN RILs(2009) | 8 | 8.21cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 8 | 24.55cM |
| Set: | B / C |
| Guttatus map status: | polymorphic by size | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCACCGAAGAAGTTGAAACC | Overgo seq fw: | CAAAGCTGCCCTAATCCACCGAAG |
| Reverse primer: | GCCTTAATAGGACCCCCAAC | Overgo seq rv: | TTCCCGGTTTCAACTTCTTCGGTG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 237 | BAC contig(s): | MlFPC1, MlFPC672, MlFPC777 |
| | | | |
| MgSTS85 | Mimulus unigene: | MgU672 | Phytome id: | mgut2782 |
| | Arabidopsis homolog: | At5g13630 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62_x_DUN RILs(2009) | 10 | 91.47cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 10 | 27.39cM |
| Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TGGGGTAAACTGAGGAGGAA | Overgo seq fw: | CGGATACTATTGGCCGAGTTAACC |
| Reverse primer: | GCGAAGACGTTTAGGTACGC | Overgo seq rv: | CTCACAATCTCAACCGGGTTAACT |
| Tm: | | Tm: | 65.40 |
| IM62 length | 711.5 | BAC contig(s): | MgFPC2800, MgFPC2932 |
| | | | |
| MgSTS86 | Mimulus unigene: | MgU680 | Phytome id: | mgut2827 |
| | Arabidopsis homolog: | At4g22220 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AGGAGAGCGGGAAGATTGTT | Overgo seq fw: | ATTGTTGATGCTTGTTTCAAGACC |
| Reverse primer: | GTCTACCCTTCACCCATTCG | Overgo seq rv: | CGGAACCGCAGCCGAAGGTCTTGA |
| Tm: | | Tm: | 65.40 |
| IM62 length | >1000 | BAC contig(s): | |
| | | | |
| MgSTS87 | Mimulus unigene: | MgU684 | Phytome id: | mgut2847 |
| | Arabidopsis homolog: | At5g17230 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 69.10cM | | M. guttatus Irn Mtn Combined(2009) | 11 | 0.00cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTTCGACGATGCAGAGAGTG | Overgo seq fw: | GCATATGCAAGCGGCAGAGCAAGA |
| Reverse primer: | ACATAAGCCCTCCTCGTGAA | Overgo seq rv: | GCAAACCGAAGAAGATTCTTGCTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 311 | BAC contig(s): | MgFPC570, MgFPC814, MlFPC1088, MlFPC132, MlFPC237, MlFPC743 |
| | | | |
| MgSTS88 | Mimulus unigene: | MgU686 | Phytome id: | mgut2858 |
| | Arabidopsis homolog: | At1g65660 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | did not amplify in any genotypes tested | Phys map status: | |
| Forward primer: | ACCACTTATCAGGCGGTGAA | Overgo seq fw: | ATATGTCCTCTGCGCCTTGGTACT |
| Reverse primer: | CCTTTCCAAGCATGACTTCC | Overgo seq rv: | GGTCTCTCTGCATTCAAGTACCAA |
| Tm: | | Tm: | 65.40 |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS89 | Mimulus unigene: | MgU695 | Phytome id: | mgut2910 |
| | Arabidopsis homolog: | At5g65280 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | did not amplify in any genotypes tested | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | AGAGCTGGCGCTTCTGTAAA | Overgo seq fw: | AAAATGAAGCAAGACGTGTAAAAT |
| Reverse primer: | GCAGTGGAAAATGAAGCAAGA | Overgo seq rv: | CCACGGCCTTGCCGGCATTTTACA |
| Tm: | | Tm: | 65.40 |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS90 | Mimulus unigene: | MgU721 | Phytome id: | mgut3056 |
| | Arabidopsis homolog: | At5g65280 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | |
| Forward primer: | TACTGTGGGGATCAAACGAA | Overgo seq fw: | GCTGATGCTTTTCTAAGAGCCGCC |
| Reverse primer: | CTGGGAGAGCTTTCTCTCGT | Overgo seq rv: | GATCTTTGAGGGAGATGGCGGCTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 644 | BAC contig(s): | |
| | | | |
| MgSTS91 | Mimulus unigene: | MgU119 | Phytome id: | mgut559 |
| | Arabidopsis homolog: | At3g56940 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 17.80cM | | M. guttatus IM62_x_DUN RILs(2009) | 11 | 11.82cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 15.11cM |
| Set: | A / D2 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CTCATGTCCAGAGACGAAGC | Overgo seq fw: | CTGGGTTTCTTCTCTACAAGGAGC |
| Reverse primer: | AGGAATCCCAAATCGAGAGC | Overgo seq rv: | TTGAGCCTCCTACCAAGCTCCTTG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 178.8 | BAC contig(s): | MgFPC684, MlFPC109, MlFPC1441, MlFPC769 |
| | | | |
| MgSTS92 | Mimulus unigene: | MgU128 | Phytome id: | |
| | Arabidopsis homolog: | At3g60320 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 2 | 85.57cM | | M. guttatus IM62_x_DUN RILs(2009) | 2 | 77.27cM |
| Set: | D2 |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CAGCTCGTCGAACTTTGTCA | Overgo seq fw: | GACTAGGCCTCGGACTTGTTGGAC |
| Reverse primer: | TTGGTTCATCGATCTCCACA | Overgo seq rv: | AGTCCAAAACGACATAGTCCAACA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 423? | BAC contig(s): | |
| | | | |
| MgSTS93 | Mimulus unigene: | MgU132 | Phytome id: | mgut607 |
| | Arabidopsis homolog: | At1g20580 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 11 | 12.00cM | | M. guttatus IM62_x_DUN RILs(2009) | 11 | 2.88cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 11 | 6.61cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCTCAAGAATGCTCCCATGT | Overgo seq fw: | GCCCCTGATGAAAACATGCTCTAG |
| Reverse primer: | CACGTCCAACACCAAGTGAC | Overgo seq rv: | TGGAAAGCTCTCACAACTAGAGCA |
| Tm: | | Tm: | 64.38 |
| IM62 length | 176 | BAC contig(s): | MgFPC1521, MgFPC1692, MgFPC2534, MgFPC981, MlFPC1, MlFPC109, MlFPC184, MlFPC746, MlFPC931 |
| | | | |
| MgSTS94 | Mimulus unigene: | MgU133 | Phytome id: | |
| | Arabidopsis homolog: | At3g04400 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus Irn Mtn Combined(2009) | 4 | 103.67cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 4 | 16.84cM |
| Set: | B / C |
| Guttatus map status: | genotyped by size (map position yet to be determined) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GCTGGGGTTATTGTGAATCC | Overgo seq fw: | ATCAGCACACTCCTTTCCAATAGG |
| Reverse primer: | TAGGCCACAAATCAGCACAC | Overgo seq rv: | ATCTGCCATCACCGGTCCTATTGG |
| Tm: | | Tm: | 65.40 |
| IM62 length | 197 | BAC contig(s): | MgFPC1765, MgFPC2307, MgFPC251, MgFPC2857, MgFPC2858, MgFPC3005, MgFPC3118 |
| | | | |
| MgSTS95 | Mimulus unigene: | MgU141 | Phytome id: | |
| | Arabidopsis homolog: | At5g38520 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 3 | 9.20cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 3 | 5.26cM |
| Set: | A / 3x3x3 |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TTGGGGAACTCTGTCGGTAG | Overgo seq fw: | AAACAAATGCATCCAGTGCCCCTT |
| Reverse primer: | GCCACCAGAACAATTGAACA | Overgo seq rv: | AAACCGGCACTGGATGAAGGGGCA |
| Tm: | | Tm: | 65.40 |
| IM62 length | 193 | BAC contig(s): | MgFPC2721, MlFPC1162, MlFPC609 |
| | | | |
| MgSTS96 | Mimulus unigene: | MgU147 | Phytome id: | mgut686 |
| | Arabidopsis homolog: | At5g55860 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | did not amplify in IM62 but did amplify in at least one other genotype (possible PCR error in IM62)) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CCTGCCATTAGGAAGCAAAA | Overgo seq fw: | TTTCTGGGCTAAGTGAAGCTCTGT |
| Reverse primer: | AGCTCCGAAAGAGCTTGAGA | Overgo seq rv: | CGTGCTGGCAAAAGAGACAGAGCT |
| Tm: | | Tm: | 65.40 |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS97 | Mimulus unigene: | MgU150 | Phytome id: | |
| | Arabidopsis homolog: | At1g80600 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D2 |
| Guttatus map status: | did not amplify in IM62 but did amplify in at least one other genotype (possible PCR error in IM62)) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | GGATCTCCTCTTGTATTCGATGA | Overgo seq fw: | TATCGGGGTATACTCTGTATGCTT |
| Reverse primer: | CACCGTCATTATATCGGGGTA | Overgo seq rv: | TACCTATGGGCCCACGAAGCATAC |
| Tm: | | Tm: | 65.40 |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS98 | Mimulus unigene: | MgU163 | Phytome id: | |
| | Arabidopsis homolog: | At4g33110 |
| Genetic marker | Physical marker |
| Map: | | Map Set | Linkage Group | Position | | M. guttatus IM62 x M. nasutus SF F2N1 (2006) | 1 | 5.40cM | | M. guttatus IM62 x M. nasutus SF F2N2 (2009) | 1 | 4.70cM |
| Set: | A |
| Guttatus map status: | map position determined | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | TCGGACGGTCTTCTGTTCAT | Overgo seq fw: | GGTCCACTTGACAGCTGAATCTTT |
| Reverse primer: | GTGATCCAATCGTCCTCGTT | Overgo seq rv: | GGAGTCCACTTATGGTAAAGATTC |
| Tm: | | Tm: | 64.38 |
| IM62 length | 183 | BAC contig(s): | MgFPC345, MlFPC1890, MlFPC747, MlFPC781, MlFPC935 |
| | | | |
| MgSTS99 | Mimulus unigene: | MgU16 | Phytome id: | mgut719 |
| | Arabidopsis homolog: | At3g08580 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | |
| Guttatus map status: | did not amplify in IM62 but did amplify in at least one other genotype (possible PCR error in IM62)) | Phys map status: | |
| Forward primer: | GAGAGGACACACCGGTTACG | Overgo seq fw: | |
| Reverse primer: | ACCATTCCAGTAAGCCATCG | Overgo seq rv: | |
| Tm: | | Tm: | |
| IM62 length | | BAC contig(s): | |
| | | | |
| MgSTS100 | Mimulus unigene: | MgU175 | Phytome id: | mgut762 |
| | Arabidopsis homolog: | At5g27710 |
| Genetic marker | Physical marker |
| Map: | Not Mapped | Set: | D |
| Guttatus map status: | amplified in IM62 (the source genotype for the EST sequence) | Phys map status: | hybridized, one or more BAC matches found in guttatus only |
| Forward primer: | CGAGCTCACCAGAACTCCTT | Overgo seq fw: | CCGGCACTTGAGCTCCGACATTGA |
| Reverse primer: | AAATCGTAGCGGCTGAGAGA | Overgo seq rv: | GTCGATGTTAACTATCTCAATGTC |
| Tm: | | Tm: | 65.40 |
| IM62 length | 133 | BAC contig(s): | |
| | | | |