These files were created by Eric Ganko of the Vision Lab.  They are based on
Mimulus guttatus 7x Scaffolds and were published here on February 23, 2009.

*mimulus_LTR_TEs.fa
these are LTR retrotransposons identified in the completed BACs. Example:
>94_gypsy_ltr_73675_77324#LTR/gypsy 
This was found on BAC 94, it is a gypsy LTR, found from 73675 to 77324, and
finally the Repeatmasker tag

*mimulus_Cnt728_repeats.fa
these are 10 consensus sequences of the Cnt728 repeat, a ~730bp repeat
associated with centromeres and published by Arpy Saunders and Lila Fishman
in Science this fall
(http://www.sciencemag.org/cgi/content/full/322/5907/1559). There is roughly
85% similarity between any two members in this list.

*mimulus_repeat_modeler_predictions.fa
These are *uncurated* in silico repeat predictions from the RepeatModeler
suite (http://www.repeatmasker.org/RepeatModeler.html). They are  consensus
repeats found after first masking the assembly with the files above, then
searching for sequences that occur >10 times in successively larger masking
iterations. They are real repeats, but they may also be components of genes.