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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Mimulus lewisii-lewisiiXcardinalis(2009)
(Reference Set)
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Maps 3
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BAC_location
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Mimulus lewisii - M. lewisii x M. cardinalis(2009) [ View Map Set Info ]
Map Name: 3
Map Start: 0.00 cM
Map Stop: 93.60 cM
Features by Type:
7 Marker
7 Total

Map Features

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Items 1 to 7 of 7.
Mimulus lewisii - M. lewisii x M. cardinalis(2009) - 3
(Click headers to resort)		 Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
MlSTS5049 Marker 0.00 No other positions
MlSTS5135 Marker 34.10 No other positions
MlSTS5254 Marker 44.60 No other positions
MlSTS5014 Marker 48.60 Mimulus lewisii - Finger Print Contigs - MlFPC1059 ML__Ba067F07 BAC 39.00 - 121.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba018A14 BAC 8.00 - 106.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC1421 ML__Ba065F10 BAC 11.00 - 58.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba008B17 BAC 4.00 - 90.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba017M16 BAC 18.00 - 103.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC731 ML__Ba069K24 BAC 49.00 - 114.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba007K11 BAC 4.00 - 102.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba092M05 BAC 28.00 - 105.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba087L07 BAC 55.00 - 120.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba026J17 BAC 0.00 - 85.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba009D04 BAC 102.00 - 180.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC294 ML__Ba049J23 BAC 21.00 - 101.00 (FPC) Automated name-based View Maps
Mimulus lewisii - Finger Print Contigs - MlFPC416 ML__Ba072P05 BAC 260.00 - 326.00 (FPC) Automated name-based View Maps
MlSTS5525 Marker 55.10 Mimulus guttatus - Finger Print Contigs - MgFPC2576 MG__Bb036F12 BAC 0.00 - 66.00 (FPC) Automated name-based View Maps
MlSTS5485 Marker 82.70 No other positions
MgSTS332 Marker 93.60 Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb001N06 BAC 188.00 - 266.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Ba020D24 BAC 39.00 - 143.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb069B10 BAC 62.00 - 168.00 (FPC) Automated name-based View Maps
Mimulus guttatus - IM62xSF F2N2(2009) - 10 MgSTS332 Marker 26.46 (cM) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb027F16 BAC 49.00 - 128.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb018J03 BAC 192.00 - 289.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb045N10 BAC 71.00 - 159.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb005C20 BAC 49.00 - 171.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb083E05 BAC 39.00 - 186.00 (FPC) Automated name-based View Maps
Mimulus guttatus - IM62xSF F2N1(2006) - 10 MgSTS332 Marker 11.90 (cM) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Bb052K03 BAC 80.00 - 144.00 (FPC) Automated name-based View Maps
Mimulus guttatus - Finger Print Contigs - MgFPC2932 MG__Ba043J02 BAC 0.00 - 147.00 (FPC) Automated name-based View Maps